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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925539.1_cds_XP_016473762.1_65858
CDS Infomation

[gene=LOC107795613] [db_xref=GeneID:107795613] [protein=pectin acetylesterase 8-like] [protein_id=XP_016473762.1] [location=join(49866..50049,50098..50148,64320..64402,64526..64655,64745..64824,64993..65079,65220..65344,66089..66149,66520..66573,66649..66726,66878..66956,67326..67465,68066..68185)] [gbkey=CDS]
Sequence

ATGGCTCAGATGAGTTACGGACGAGCCACAGAGCAATTGGAACCTGCTGCCCAGTGCTGG
TTCTGGTGTGTCGCACCTGCGACATTTTGTGCGCAGGTGCATGGTCGCTCCTGCGGAATT
CCAGTTGCTTCTGCGACAATAGACAGCCCTGCCGAGCTCCACTTCTTCGGAGAAATGAGC
GCAGGTGCGACATTTCTGGGCACAGATGCGGCCACTGGACAAGCTGCCCCGTTCTTTTGC
TTGGATGGGTCTCCACCAGCATTCTATTACGACAAGGGACATGGAGAAGGAGCTAATAAT
TGGATTATCTACTTTAGGGGAGGAGAATGGTGCTATAACGTGATAGATTGCCTCAATCGC
ACAAAGACAGAAAAAGGTTCCTCAAAACTTGCTCCAAAGCAAAGATCATTTTATGGAATA
CTTAGCAACAACAAAACACTGAATCCAGATTTCTACAATTGGAATAGAGTAATGGTTATA
TATTGCGATGGAGCATCGTTCACAGGAGACGTTGAAATAGTTGATCCGGTCACTAACCTT
CATTTTAGAGGAGCAAGGATTTTCCATGCATTGATCGAACATTTCTTGGCGAAAGGGATG
AAGGATGCAAAAAATGCCATTCTCGCAGGTGGTTCAGCTGGAGGACTGCCTGCTTTACTA
CACTGTGATCGTTTTCGAGCTCTTCTTCCTAACTCAGCTAGAGTAAAGTGTCTTGCTGAT
GGTAGTTATTTTCTCCACAAGAAAAACATGAAGGAAATACCATTCATGGATATTGTCAAT
GAAGGACTAATTACCTTACATCATTCAGCCAAGATGTTGCCATCATCCTGCATTTCAAAA
ATGAGACCATCTTTGTGCCTTTTTCCACAATATTTTCAACAAGAAATCCAGACACCATTT
TTCATAGTCAACTCAATGTTTGACACATTTCAGATAAACAAGACTTTTCTTGGTTATTAT
GAAGACCTTAATAACAATACGTGCTCAGCTACTCTTGTTAAGACTTTACAAGATTTTAAA
CAGGAATTCTTAAGTGCATTACCGAAACAAAGTGATTGTTCTTCATCAAGAGGAATGTTT
ATTGACTCTTGCTTGATTCATTCCCAAATATTAAGTGGTGTTGGTTGGAATGGCTTCACG
GTACATAATAAGACAATTGCAGAGGCATTTAGCGATTGGTACTTCGACCGAAGTTCTGTC
CAATTGATAGACACACCAGACTTGCCACTGAATTGTTACAAATTCCCCTCTATTACAAGC
TTTTGCACCTAA

Peptide Sequence

PEP ID

XP_016473762.1
PEP Infomation

PREDICTED: pectin acetylesterase 8-like [Nicotiana tabacum]
Sequence

MAQMSYGRATEQLEPAAQCWFWCVAPATFCAQVHGRSCGIPVASATIDSPAELHFFGEMS
AGATFLGTDAATGQAAPFFCLDGSPPAFYYDKGHGEGANNWIIYFRGGEWCYNVIDCLNR
TKTEKGSSKLAPKQRSFYGILSNNKTLNPDFYNWNRVMVIYCDGASFTGDVEIVDPVTNL
HFRGARIFHALIEHFLAKGMKDAKNAILAGGSAGGLPALLHCDRFRALLPNSARVKCLAD
GSYFLHKKNMKEIPFMDIVNEGLITLHHSAKMLPSSCISKMRPSLCLFPQYFQQEIQTPF
FIVNSMFDTFQINKTFLGYYEDLNNNTCSATLVKTLQDFKQEFLSALPKQSDCSSSRGMF
IDSCLIHSQILSGVGWNGFTVHNKTIAEAFSDWYFDRSSVQLIDTPDLPLNCYKFPSITS
FCT

Transcript Sequence

Gene sequence data has not been registered.